Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015878223.1_cds_XP_016436714.1_32544
CDS Infomation

[gene=LOC107762829] [db_xref=GeneID:107762829] [protein=DNA (cytosine-5)-methyltransferase DRM2-like] [protein_id=XP_016436714.1] [location=complement(join(321273..321710,321899..322627,322766..322857,323162..323288,323946..324092,325097..325140,325225..325324,325461..325607,325775..325777))] [gbkey=CDS]
Sequence

ATGGACAACAATCTTTCTGGAGAAGACAATGACAACATTGACTGGGATACCGAAGATGAA
CTAGAAATACAGGAAATACAGGACACAACATTTTCCTCATGCATGGATTTAAGAACTACT
GGACAACATACTGTTAGATGTGATGGGGAGGCAAGCTCATCATCAGTACCCTGTCAGTCC
AAGTTCATTCAGCAGTTTGTAGTGATGGGATTTCCTGAAGCATCTATTGCAAAAGCAATA
GAGCAAAATGGAGAAAATTCAGATTTGGTGTTGGATGCTCTTCTGACATTCAAGGCCCTT
GAAGACTCTCCTGAAGAACAACCCAGTGCTAGCCCTCAACCCTGCATTAATTCTGACGAT
AGCTCTTCTGAATACAACGAGAACTTTCTGGATGATGTGTATGAGGAAGATAGTTGGTCC
TCCGACTCAGACAGCTGTAGAAATTCTGCTAAACAATGCTATGTGAAAGTTGAGAGCAGT
TCTTCATCTGAAAAAGAGCAGACTTTATCGTTCCTGGCAAGTATGGGATACCCCGCGGAA
GAGGCTTCCATAGCAATGGAGAGATGTGGTCCAGATGCATCGGTTGCTGAATTGACAGAT
TTCATATGTGCTGCTCAAATGGCAAGAGCAGAAGATGTCTATCTGCCAGAAGATGTAAAG
CCAAAACTGAACCATATATTGAATGGTAGTGGTGGATACAAGAAAAGAAAGATGTACAAT
GAATTGTGCAAAAGAAAAAAGGCAAAGGCGATTTTTGAGGAAGAGACAATTCGTTTGCCC
AAACCTATGATTGGATTTGGGGTTCCTACCGAACTAGTTCCAGCAATGGTTCAAAGAACT
CTTCCCGAGCAAGCTGTTGGACCCCCGTTTTTCTACTATGAAAATGTTGCTCTAGCTCCA
AAGGGTGTGTGGGACACAATTTCTAGATTTTTGTACGATATTGAGCCCGAGTTTGTCGAC
TCCAAATATTTTTGTGCTGCTGCAAGAAAAAGGGGTTATATTCATAATTTGCCGATTGAA
AATAGATTTCCTTTGTTTCCACTTGCCCCACGTACCATTCATGAGGCACTTCCCCTGTCA
AAGAAATGGTGGCCATCTTGGGATCCACGGACAAAGTTAAATTGTTTGCAAACAGCCATT
GGAAGTGCACAATTGACGAATAGGATTAGGAAAGCCGTGGAGGACTTTGATGGTGAGCCA
CCAATGAGAGTTCAGAAGTTTGTTCTTGATCAATGTCGGAAGTGGAATTTGGTGTGGGTT
GGGAGAAACAAAGTTGCTCCTTTGGAGCCTGATGAAGTTGAAATGCTATTGGGATTTCCA
AAGAACCATACCAGGGGAGGTGGTATAAGTAGGACCGATAGATACAAGTCGCTTGGTAAT
TCGTTCCAGGTTGACACTGTGGCGTACCATTTGTCGGTATTGAAAAACTTGTTTCCCGAT
GGTATCAACGTCTTATCACTCTTCTCTGGAATTGGCGGTGGTGAAGTTGCTCTTTATCGT
CTCGGTATTCCACTAAACACAGTGGTTTCTGTGGAAAAATCTGAAGTCAACAGGGATATT
GTGAGAAGCTGGTGGGAGCAAACTAATCAGAAAGGGAATCTTATACATTTTAACGATGTG
CAGCAGCTGAATGGAGACCGCTTGGAGCAACTGATAGAGTCATTTGGAGGATTTGATTTG
GTAATTGGTGGAAGCCCGTGCAATAACCTTGCAGGCAGTAACAGAGTGAGCAGGGATGGG
CTTGAAGGCAAAGAGTCTTCCCTATTTTATGACTATGTTCGGATATTGGACTTGGTCAAG
TCCATAATGTCCAGACATAGACATTAG

Peptide Sequence

PEP ID

XP_016436714.1
PEP Infomation

PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Nicotiana tabacum]
Sequence

MDNNLSGEDNDNIDWDTEDELEIQEIQDTTFSSCMDLRTTGQHTVRCDGEASSSSVPCQS
KFIQQFVVMGFPEASIAKAIEQNGENSDLVLDALLTFKALEDSPEEQPSASPQPCINSDD
SSSEYNENFLDDVYEEDSWSSDSDSCRNSAKQCYVKVESSSSSEKEQTLSFLASMGYPAE
EASIAMERCGPDASVAELTDFICAAQMARAEDVYLPEDVKPKLNHILNGSGGYKKRKMYN
ELCKRKKAKAIFEEETIRLPKPMIGFGVPTELVPAMVQRTLPEQAVGPPFFYYENVALAP
KGVWDTISRFLYDIEPEFVDSKYFCAAARKRGYIHNLPIENRFPLFPLAPRTIHEALPLS
KKWWPSWDPRTKLNCLQTAIGSAQLTNRIRKAVEDFDGEPPMRVQKFVLDQCRKWNLVWV
GRNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKNLFPD
GINVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQKGNLIHFNDV
QQLNGDRLEQLIESFGGFDLVIGGSPCNNLAGSNRVSRDGLEGKESSLFYDYVRILDLVK
SIMSRHRH

Transcript Sequence

Gene sequence data has not been registered.